Dr hab. Dariusz Dziga
room: A204 (4.1.32), phone: +48 12 664 63 51, e-mail: dariusz.dziga@uj.edu.pl
Dr Ariel Kamiński
room: A203 (4.1.33), phone: +48 12 664 65 41, e-mail: ariel.kaminski@uj.edu.pl
Dr Ewa Latkowska
room: A203 (4.1.33), phone: +48 12 664 65 41, e-mail: ewa.latkowska@uj.edu.pl
Mgr Urszula Czaja-Prokop
room: A241 (4.1.31), telefon: 12 664 65 33, e-mail: ula.czaja-prokop@uj.edu.pl
Dr Kornelia Duchnik
room: A241 (4.1.31), phone: +48 12 664 65 33, e-mail: kornelia.zabaglo@uj.edu.pl
Dr Nada Tokodi
room: A242 (4.1.30), phone: 12 664 65 15, e-mail: nada.tokodi@uj.edu.pl
Adam Antosiak, room: A204 (4.1.32), phone: +48 12 664 63 51, e-mail: adam.antosiak@doctoral.uj.edu.pl
Barbara Klimczak, room: A241 (4.1.31), phone: 12 664 65 33, e-mail: barbara.klimczak@doctoral.uj.edu.pl
Bartosz Lelito, room: A203 (4.1.33), phone: 12 664 65 41, e-mail: bartosz.lelito@doctoral.uj.edu.pl
Saravana Kumar Selvaraj, room: A203 (4.1.33), phone: 12 664 65 41, e-mail: saravana08.kumar@doctoral.uj.edu.pl
Interaction of cyanobacteria or lichens in natural environment
- Cyanobacteria and cyanophages – mechanisms and consequences of interactions. Physiological and biochemical analyses using omics technics (transcriptomics, proteomics, metabolomics).
- Microbial degradation of cyanotoxins, relations between microcystin producers and degraders.
- Adaptation mechanisms (on genetic, physiological and biochemical level) of invasive cyanobacteria species to temperate climate and their response to stressful factors.
- Biochemical changes in trees in response to colonization by epiphytic lichen species.
- Mechanisms of lichen adaptation to environmental stress factors, e.g. heavy metal contamination, UV radiation, high temperature.
Secondary metabolites of cyanobacteria and lichens
- Metabolome analysis of cyanobacteria infected by cyanophages
- Isolation and identification of secondary metabolites synthesized by cyanobacteria or lichens by HPLC and LC-MS/MS
- Metabolomic analysis of compounds produced by epiphytic lichens and penetrating into tree tissues.
- Impact of biotic and abiotic factors on the synthesis of cyanobacterial secondary metabolites
Monitoring, phytoremediation and bioremediation
- Practical aspects of microcystin biodegradation – genetic engineering employed in enzyme-based and microorganism-based bioremediation of cyanotoxins.
- Investigation of the possibility of using heavy metal hyperaccumulators among lichens in bioremediation of post-industrial areas contaminated with heavy metals.
Instruments
- HPLC systems: Waters and Agilent 1220 Infinity
- Ultra High-Performance Liquid Chromatograph Shimadzu Nexera-I LC-2040C 3D Plus
- Spectrophotometer JASCO V-650 UV-VIS and Helios Alfa Thermo Spectronic
- Spectrophotometer NanoDrop (DeNovix)
- Nikon Eclipse TS-100F Microscope with a camera
- Cyanobacteria and Algae Growth Chamber, Fitotron FD 711
- Low-Pressure Liquid Chromatography System ECONO
- Clark Electrode with equipment
- Infra-red gas analyzer (IRGA)
- Thermocycler T100 (BioRad)
- Equipment for electrophoresis of proteins and nucleic acids (BioRad)
- Solid Phase Extraction System (Supelco)
- Homogenizer Omni Sonic Ruptor 400
Methods
- Genetic engineering of bacteria and cyanobacteria (cloning, transformation, recombination etc.)
- Purification of recombinant proteins
- qPCR for the quantitative analysis of gene expression
- PAM fluorymetry in the monitoring of the light phase of photosynthesis in cyanobacteria
- Cyanophage titration by MPN and qPCR
- Determination of the activity of selected enzymes of cyanobacteria, lichens and plants by colorimetric and fluorometric methods
- The isolation of cyanobacterial membranes by centrifugation in saccharose gradient
- Determination of membrane fluidity by EPR
- Measurement of the intensity of respiration and photosynthesis processes in plants, algae and cyanobacteria using the Clark oxygen electrode and an infrared gas analyzer (IRGA)
- Analysis of the concentration of selected primary and secondary metabolites by HPLC
- Determination of photosynthetic pigments concentration by colorimetric method
- Purification and concentration of selected secondary metabolites using Solid Phase Extraction (SPE)
- Colorimetric measurement of lipid peroxidation
- Adam Antosiak: Comprehensive description of the cyanophage infection in freshwater cyanobacteria. (2022–2025). PRELUDIUM, National Science Centre.
- Dariusz Dziga: Viral control of harmful cyanobacterial blooms in freshwater ecosystems. DAINA 2 (Polish-Lithuanian Funding Initiative), National Science Centre (2021–2024)
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Ewa Latkowska: Targeted analysis of lichen secondary metabolites in the tissues of the inhabited trees. (2021–2022). MINIATURA-5, National Science Centre.
- Ariel Kamiński: Investigation of phytoremediation of cylindrospermopsin and its impact on the physiology of water plant. (2017–2020). OPUS 12, National Science Centre.
- Saładyga M, Kucała M, Adamski M, Selvaraj S, Kaminski A. Phytoremediation of a mixture of toxic cyanobacteria. Does phytoplankton composition affect the amount of toxins removed? The Journal of Environmental Chemical Engineering 2023;11(3):110158; doi.org/10.1016/j.jece.2023.110158
- Chowaniec K, Latkowska E & Skubała K. Effect of thallus melanisation on the sensitivity of lichens to heat stress. Scientific Reports 2023; 13: 5083; doi.org/10.1038/s41598-023-32215-1
- Antosiak A, Šulčius S, Malec P, Tokodi N, Łobodzińska A, Dziga D. Cyanophage infections reduce photosynthetic activity and expression of CO2 fixation genes in the freshwater bloom-forming cyanobacterium Aphanizomenon flos-aquae. Harmful Algae. 2022; 116: 102215; doi.org/10.1016/j.hal.2022.102215
- Rola K, Latkowska E, Ogar W, Osyczka P. Towards understanding the effect of heavy metals on mycobiont physiological condition in a widespread metal-tolerant lichen Cladonia rei. Chemosphere. 2022; 308:136365; doi.org/10.1016/j.chemosphere.2022.136365
- Kaminski A, Edwards C, Chrapusta-Srebrny E et al. Anatoxin-a degradation by using titanium dioxide. Science of the Total Environment. 2021; 756:143590; doi.org/10.1016/j.scitotenv.2020.143590
- Adamski M, Kaminski A. Impact of cylindrospermopsin and its decomposition products on antioxidant properties of glutathione. Algal Research. 2021; 56:102305; doi.org/10.1016/j.algal.2021.102305
- Keliri E, Paraskeva C, Sofokleous A, Sukenik A, Dziga D, Chernova E, Brient L and Antoniou M.G. Occurrence of a single-species cyanobacterial bloom in a lake in Cyprus: monitoring and treatment with hydrogen peroxide-releasing granules. Environ Sci Eur. 2021; 33, 31; doi.org/10.1186/s12302-021-00471-5
- Adamski M, Zimolag E, Kaminski A, Drukała J, Bialczyk J. Effects of cylindrospermopsin, its decomposition products, and anatoxin-a on human keratinocytes. Science of The Total Environment. 2021; 765:142670; doi.org/10.1016/j.scitotenv.2020.142670
- Osyczka P, Latkowska E, Rola K. Metabolic processes involved with sugar alcohol and secondary metabolite production in the hyperaccumulator lichen Diploschistes muscorum reveal its complex adaptation strategy against heavy-metal stress. Fungal Biology. 2021; doi.org/10.1016/j.funbio.2021.08.002
- Dexter J, Dziga D, Lv J, Zhu J, Strzalka W, Maksylewicz A, Maroszek M, Marek S, Fu P. Heterologous expression of mlrA in a photoautotrophic host - Engineering cyanobacteria to degrade microcystins. Environmental Pollution. 2018; 237: 926-935; doi.org/10.1016/j.watres.2020.116646
- The effect of environmental factors (biotic and abiotic) on the production of lichen metabolites.
- Analysis of biochemical changes occurring in tree tissues as a result of their colonization by lichens.
- Molecular backgrounds of cyanophage infection – analysis of mechanisms on genetic, physiological and biochemical level.
- Response mechanisms of Raphidiopsis raciborskii to environmental stress condition (effect of H2O2 and chill/light).
- Separation, identification and acquisition of bioactive secondary metabolites synthesized by lichens.
- Design od production of model cyanobacterial constructs by CyanoGate technic; analysis and optimization of protein productivity (MlrA in particular).
- Construction of algae-microbial fuel cell (aMFC) that employs cyanobacteria with the overexpression of valuable protein; the analysis of aMFC functionality.
Interest in microbial biochemistry, physiology and genetic, fluent English.